sample	chr	startpos	endpos	nMajor	nMinor
TCGA-VQ-A8P3	1	61735	14315684	1	1
TCGA-VQ-A8P3	1	14317576	14564669	1	0
TCGA-VQ-A8P3	1	14564701	14822916	1	1
TCGA-VQ-A8P3	1	14823190	15002813	2	1
TCGA-VQ-A8P3	1	15006363	22035860	1	1
TCGA-VQ-A8P3	1	22036025	22371404	1	0
TCGA-VQ-A8P3	1	22373624	31917971	1	1
TCGA-VQ-A8P3	1	31919017	32171846	1	0
TCGA-VQ-A8P3	1	32172623	95212662	1	1
TCGA-VQ-A8P3	1	95213439	95266371	1	0
TCGA-VQ-A8P3	1	95266433	177929940	1	1
TCGA-VQ-A8P3	1	177930642	177979808	1	0
TCGA-VQ-A8P3	1	177980111	178212121	0	0
TCGA-VQ-A8P3	1	178225071	204209625	1	1
TCGA-VQ-A8P3	1	204209991	204350074	0	0
TCGA-VQ-A8P3	1	204353015	233148539	1	1
TCGA-VQ-A8P3	1	233150270	233493700	1	0
TCGA-VQ-A8P3	1	233495365	245898622	1	1
TCGA-VQ-A8P3	1	245899113	246040115	1	0
TCGA-VQ-A8P3	1	246041068	246356302	2	1
TCGA-VQ-A8P3	1	246358308	246771192	1	0
TCGA-VQ-A8P3	1	246772019	249224388	1	1
TCGA-VQ-A8P3	2	12784	41702611	1	1
TCGA-VQ-A8P3	2	41704150	42318083	1	0
TCGA-VQ-A8P3	2	42318964	43086979	1	1
TCGA-VQ-A8P3	2	43088304	43555805	2	1
TCGA-VQ-A8P3	2	43559476	79400146	1	1
TCGA-VQ-A8P3	2	79400647	79985605	1	0
TCGA-VQ-A8P3	2	79985998	160187589	1	1
TCGA-VQ-A8P3	2	160189571	160562905	1	0
TCGA-VQ-A8P3	2	160567230	168950499	1	1
TCGA-VQ-A8P3	2	168954505	169490112	1	0
TCGA-VQ-A8P3	2	169490373	178016765	1	1
TCGA-VQ-A8P3	2	178020380	178126732	3	1
TCGA-VQ-A8P3	2	178131696	187446672	1	1
TCGA-VQ-A8P3	2	187446708	187508542	0	0
TCGA-VQ-A8P3	2	187514606	212437373	1	1
TCGA-VQ-A8P3	2	212441596	212691392	1	0
TCGA-VQ-A8P3	2	212691705	216892446	1	1
TCGA-VQ-A8P3	2	216892754	217035200	1	0
TCGA-VQ-A8P3	2	217042498	241509712	1	1
TCGA-VQ-A8P3	2	241515252	241571801	0	0
TCGA-VQ-A8P3	2	241571858	242194583	1	1
TCGA-VQ-A8P3	2	242198439	242321026	0	0
TCGA-VQ-A8P3	2	242321083	243089456	1	1
TCGA-VQ-A8P3	3	60345	19924647	1	1
TCGA-VQ-A8P3	3	19928611	20480994	1	0
TCGA-VQ-A8P3	3	20487790	25021323	1	1
TCGA-VQ-A8P3	3	25023961	25108736	1	0
TCGA-VQ-A8P3	3	25108803	45025117	1	1
TCGA-VQ-A8P3	3	45025647	45169491	1	0
TCGA-VQ-A8P3	3	45169634	49953078	1	1
TCGA-VQ-A8P3	3	49957272	50077528	0	0
TCGA-VQ-A8P3	3	50081046	52747237	1	1
TCGA-VQ-A8P3	3	52749790	53045925	1	0
TCGA-VQ-A8P3	3	53053634	60011297	1	1
TCGA-VQ-A8P3	3	60012350	60067878	1	0
TCGA-VQ-A8P3	3	60071959	60264382	1	1
TCGA-VQ-A8P3	3	60264473	60478040	1	0
TCGA-VQ-A8P3	3	60479380	60598617	0	0
TCGA-VQ-A8P3	3	60604489	71268667	1	1
TCGA-VQ-A8P3	3	71269067	71407463	1	0
TCGA-VQ-A8P3	3	71407864	172396746	1	1
TCGA-VQ-A8P3	3	172402821	172490202	1	0
TCGA-VQ-A8P3	3	172490552	174933353	1	1
TCGA-VQ-A8P3	3	174933478	175365837	1	0
TCGA-VQ-A8P3	3	175368191	197896118	1	1
TCGA-VQ-A8P3	4	12281	2028562	1	1
TCGA-VQ-A8P3	4	2035597	3430512	1	0
TCGA-VQ-A8P3	4	3431195	7944194	1	1
TCGA-VQ-A8P3	4	7947564	8234904	1	0
TCGA-VQ-A8P3	4	8236935	151310094	1	1
TCGA-VQ-A8P3	4	151315132	151586263	1	0
TCGA-VQ-A8P3	4	151588054	191027923	1	1
TCGA-VQ-A8P3	5	15532	516321	1	1
TCGA-VQ-A8P3	5	516808	886987	0	0
TCGA-VQ-A8P3	5	896726	58266784	1	1
TCGA-VQ-A8P3	5	58266796	58597889	0	0
TCGA-VQ-A8P3	5	58609468	58697865	1	0
TCGA-VQ-A8P3	5	58698104	65961205	1	1
TCGA-VQ-A8P3	5	65961733	66437122	1	0
TCGA-VQ-A8P3	5	66442385	141688213	1	1
TCGA-VQ-A8P3	5	141689369	141863017	1	0
TCGA-VQ-A8P3	5	141863604	180790320	1	1
TCGA-VQ-A8P3	6	149661	1617143	1	1
TCGA-VQ-A8P3	6	1621404	2293548	0	0
TCGA-VQ-A8P3	6	2299253	5127155	1	1
TCGA-VQ-A8P3	6	5127747	5308107	1	0
TCGA-VQ-A8P3	6	5311245	5401630	1	1
TCGA-VQ-A8P3	6	5402070	5683219	1	0
TCGA-VQ-A8P3	6	5684356	20483770	1	1
TCGA-VQ-A8P3	6	20484605	20837576	1	0
TCGA-VQ-A8P3	6	20844151	26019212	1	1
TCGA-VQ-A8P3	6	26027420	26198046	0	0
TCGA-VQ-A8P3	6	26198449	26251601	1	0
TCGA-VQ-A8P3	6	26256526	35832968	1	1
TCGA-VQ-A8P3	6	35835038	36019336	1	0
TCGA-VQ-A8P3	6	36022628	148328876	1	1
TCGA-VQ-A8P3	6	148333058	148591141	1	0
TCGA-VQ-A8P3	6	148595858	148745251	0	0
TCGA-VQ-A8P3	6	148745989	171051005	1	1
TCGA-VQ-A8P3	7	43259	1926244	1	1
TCGA-VQ-A8P3	7	1928662	2414587	1	0
TCGA-VQ-A8P3	7	2414757	27650127	1	1
TCGA-VQ-A8P3	7	27654692	27781941	1	0
TCGA-VQ-A8P3	7	27787370	101517242	1	1
TCGA-VQ-A8P3	7	101520542	101674257	1	0
TCGA-VQ-A8P3	7	101681375	101872326	0	0
TCGA-VQ-A8P3	7	101873282	110382065	1	1
TCGA-VQ-A8P3	7	110382606	110629010	1	0
TCGA-VQ-A8P3	7	110631998	157471576	1	1
TCGA-VQ-A8P3	7	157472040	157584072	1	0
TCGA-VQ-A8P3	7	157595249	157753101	0	0
TCGA-VQ-A8P3	7	157754305	158745142	1	0
TCGA-VQ-A8P3	7	158745421	159127004	1	1
TCGA-VQ-A8P3	8	31254	39769375	1	1
TCGA-VQ-A8P3	8	39769593	39979339	2	1
TCGA-VQ-A8P3	8	39986379	48723220	1	1
TCGA-VQ-A8P3	8	48723801	49975341	1	0
TCGA-VQ-A8P3	8	49975746	141099377	1	1
TCGA-VQ-A8P3	8	141104679	141134595	0	0
TCGA-VQ-A8P3	8	141135655	141457201	1	0
TCGA-VQ-A8P3	8	141459684	146298155	1	1
TCGA-VQ-A8P3	9	46587	704859	1	1
TCGA-VQ-A8P3	9	705168	849537	3	1
TCGA-VQ-A8P3	9	849625	3665646	1	1
TCGA-VQ-A8P3	9	3667908	4099325	2	1
TCGA-VQ-A8P3	9	4099566	7167481	1	1
TCGA-VQ-A8P3	9	7167510	7267702	2	1
TCGA-VQ-A8P3	9	7268068	20590096	1	1
TCGA-VQ-A8P3	9	20590209	20880047	1	0
TCGA-VQ-A8P3	9	20881286	79777085	1	1
TCGA-VQ-A8P3	9	79777121	79936415	1	0
TCGA-VQ-A8P3	9	79937288	112097498	1	1
TCGA-VQ-A8P3	9	112097674	112911644	1	0
TCGA-VQ-A8P3	9	112919191	114976870	1	1
TCGA-VQ-A8P3	9	114980618	115674592	1	0
TCGA-VQ-A8P3	9	115676215	140527433	1	1
TCGA-VQ-A8P3	9	140528131	140664865	1	0
TCGA-VQ-A8P3	9	140666521	141091394	1	1
TCGA-VQ-A8P3	10	72759	442348	1	1
TCGA-VQ-A8P3	10	443074	691738	1	0
TCGA-VQ-A8P3	10	705435	855107	1	1
TCGA-VQ-A8P3	10	855263	1052248	1	0
TCGA-VQ-A8P3	10	1052950	74141010	1	1
TCGA-VQ-A8P3	10	74141039	74256030	1	0
TCGA-VQ-A8P3	10	74257119	74573806	0	0
TCGA-VQ-A8P3	10	74577598	77172061	1	1
TCGA-VQ-A8P3	10	77174934	77414660	0	0
TCGA-VQ-A8P3	10	77414885	77438299	1	0
TCGA-VQ-A8P3	10	77438370	78317235	1	1
TCGA-VQ-A8P3	10	78318572	78417918	2	1
TCGA-VQ-A8P3	10	78418220	135506704	1	1
TCGA-VQ-A8P3	11	198572	2479945	1	1
TCGA-VQ-A8P3	11	2480237	2852585	0	0
TCGA-VQ-A8P3	11	2857618	3678446	1	1
TCGA-VQ-A8P3	11	3678678	3939198	1	0
TCGA-VQ-A8P3	11	3940738	46569272	1	1
TCGA-VQ-A8P3	11	46570859	47053002	1	0
TCGA-VQ-A8P3	11	47062466	63860826	1	1
TCGA-VQ-A8P3	11	63861317	63973396	0	0
TCGA-VQ-A8P3	11	63983604	122971458	1	1
TCGA-VQ-A8P3	11	122975998	123031158	1	0
TCGA-VQ-A8P3	11	123032669	134944770	1	1
TCGA-VQ-A8P3	12	150442	2981965	1	1
TCGA-VQ-A8P3	12	2984833	3140622	1	0
TCGA-VQ-A8P3	12	3141495	12675854	1	1
TCGA-VQ-A8P3	12	12677613	13043119	1	0
TCGA-VQ-A8P3	12	13045723	50568790	1	1
TCGA-VQ-A8P3	12	50572299	51125141	1	0
TCGA-VQ-A8P3	12	51127738	123498815	1	1
TCGA-VQ-A8P3	12	123501309	123826533	1	0
TCGA-VQ-A8P3	12	123840573	125451505	1	1
TCGA-VQ-A8P3	12	125456505	125608422	1	0
TCGA-VQ-A8P3	12	125610880	133778189	1	1
TCGA-VQ-A8P3	13	19026949	50550081	1	1
TCGA-VQ-A8P3	13	50550464	50979655	1	0
TCGA-VQ-A8P3	13	50985185	73348091	1	1
TCGA-VQ-A8P3	13	73348929	73550343	1	0
TCGA-VQ-A8P3	13	73550809	115108397	1	1
TCGA-VQ-A8P3	14	19002124	35239965	1	1
TCGA-VQ-A8P3	14	35240255	35557981	1	0
TCGA-VQ-A8P3	14	35559479	66603278	1	1
TCGA-VQ-A8P3	14	66607555	67533273	1	0
TCGA-VQ-A8P3	14	67535432	107285437	1	1
TCGA-VQ-A8P3	15	20016328	58985389	1	1
TCGA-VQ-A8P3	15	58985852	59214216	1	0
TCGA-VQ-A8P3	15	59220394	59403147	0	0
TCGA-VQ-A8P3	15	59407251	60678350	1	1
TCGA-VQ-A8P3	15	60678712	60828558	1	0
TCGA-VQ-A8P3	15	60833824	64377008	1	1
TCGA-VQ-A8P3	15	64377881	64816432	1	0
TCGA-VQ-A8P3	15	64817087	67550670	1	1
TCGA-VQ-A8P3	15	67555335	68040266	1	0
TCGA-VQ-A8P3	15	68047015	86369965	1	1
TCGA-VQ-A8P3	15	86372545	102469040	3	1
TCGA-VQ-A8P3	16	60777	257272	1	1
TCGA-VQ-A8P3	16	259790	383753	0	0
TCGA-VQ-A8P3	16	385055	711905	1	0
TCGA-VQ-A8P3	16	714155	4381809	1	1
TCGA-VQ-A8P3	16	4389926	4887670	1	0
TCGA-VQ-A8P3	16	4889071	19404599	1	1
TCGA-VQ-A8P3	16	19404645	19697032	1	0
TCGA-VQ-A8P3	16	19697537	57632170	1	1
TCGA-VQ-A8P3	16	57632536	57694342	1	0
TCGA-VQ-A8P3	16	57695510	63620738	1	1
TCGA-VQ-A8P3	16	63622336	64232510	2	1
TCGA-VQ-A8P3	16	64233136	72243082	1	1
TCGA-VQ-A8P3	16	72243582	72658742	1	0
TCGA-VQ-A8P3	16	72667310	78609572	1	1
TCGA-VQ-A8P3	16	78614214	78865389	1	0
TCGA-VQ-A8P3	16	78865890	79081202	0	0
TCGA-VQ-A8P3	16	79081741	79223074	1	0
TCGA-VQ-A8P3	16	79223136	89391999	1	1
TCGA-VQ-A8P3	16	89393562	89607414	0	0
TCGA-VQ-A8P3	16	89612769	89828412	1	1
TCGA-VQ-A8P3	16	89828669	90287535	1	0
TCGA-VQ-A8P3	17	526	2630722	1	1
TCGA-VQ-A8P3	17	2631985	2889869	1	0
TCGA-VQ-A8P3	17	2890191	7158043	1	1
TCGA-VQ-A8P3	17	7158498	7472884	1	0
TCGA-VQ-A8P3	17	7473457	13833728	1	1
TCGA-VQ-A8P3	17	13835369	14108925	1	0
TCGA-VQ-A8P3	17	14109049	55957964	1	1
TCGA-VQ-A8P3	17	55959944	56141170	1	0
TCGA-VQ-A8P3	17	56142411	79513952	1	1
TCGA-VQ-A8P3	17	79531526	80179003	1	0
TCGA-VQ-A8P3	17	80202712	80649232	1	1
TCGA-VQ-A8P3	17	80652880	80909086	1	0
TCGA-VQ-A8P3	17	80909157	81049726	1	1
TCGA-VQ-A8P3	18	48133	78015057	1	1
TCGA-VQ-A8P3	19	90910	18313515	1	1
TCGA-VQ-A8P3	19	18322141	18475730	0	0
TCGA-VQ-A8P3	19	18475868	59097854	1	1
TCGA-VQ-A8P3	20	61305	14756023	1	1
TCGA-VQ-A8P3	20	14756166	15436002	0	0
TCGA-VQ-A8P3	20	15443446	15481797	1	0
TCGA-VQ-A8P3	20	15481966	62956153	1	1
TCGA-VQ-A8P3	21	10736871	27271030	1	1
TCGA-VQ-A8P3	21	27272159	27502442	1	0
TCGA-VQ-A8P3	21	27502468	36168949	1	1
TCGA-VQ-A8P3	21	36171574	36415888	1	0
TCGA-VQ-A8P3	21	36420388	37203854	1	1
TCGA-VQ-A8P3	21	37210898	37537963	1	0
TCGA-VQ-A8P3	21	37538444	37633307	0	0
TCGA-VQ-A8P3	21	37633823	48096957	1	1
TCGA-VQ-A8P3	22	16052528	29157487	1	1
TCGA-VQ-A8P3	22	29160437	29429955	0	0
TCGA-VQ-A8P3	22	29429997	46789280	1	1
TCGA-VQ-A8P3	22	46789842	47010615	0	0
TCGA-VQ-A8P3	22	47022759	47213721	1	0
TCGA-VQ-A8P3	22	47214796	47264009	0	0
TCGA-VQ-A8P3	22	47264769	47443753	1	0
TCGA-VQ-A8P3	22	47444180	51234455	1	1
TCGA-VQ-A8P3	X	168477	6969112	1	0
TCGA-VQ-A8P3	X	6970004	7180731	0	0
TCGA-VQ-A8P3	X	7182492	10550225	1	0
TCGA-VQ-A8P3	X	10557848	10674873	0	0
TCGA-VQ-A8P3	X	10674880	57394102	1	0
TCGA-VQ-A8P3	X	57394428	57490940	0	0
TCGA-VQ-A8P3	X	57500671	96382530	1	0
TCGA-VQ-A8P3	X	96383743	96751482	0	0
TCGA-VQ-A8P3	X	96752515	154929105	1	0
TCGA-VQ-A8P3	X	154929308	155233846	2	1
